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OCR for page 196
H
List of Acronyms
ACS American Chemical Society
ADME-Tox absorption, distribution, metabolism, excretion, and toxicity
AFOSR Air Force Office of Scientific Research
AFS Andrew File System
AIChE American Institute of Chemical Engineers
ASCI Advanced Simulation and Computing Program
BOMD conventional Born-Oppenheimer molecular dynamics
CBS complete basis set
CCCBDB NIST Computational Chemistry Comparison and Benchmark
Database
CCSD coupled cluster theory with single and double excitations
CCSD(T) CCSD with perturbative correction for triple excitations
CI configuration interaction
CMDE Collaborative Modeling-Data Environments
CPMD Car-Parinello molecular dynamics
DAK differential-algebraic equations
DD direct dynamics
DFT density functional theory
ECEPP/3 Empirical Conformational Energy Program for Peptides
EMSL Environmental Molecular Sciences Laboratory
196
OCR for page 197
APPENDIX H 197
GB generalized Born
HE
ILP
IT
G2
LD
LDA
LLNL
MD
MP2
MRI
Integer Linear Programming
information technology
Gaussian-2 theory
linkage disequilibrium
local density approximation
Lawrence Livermore National Laboratory
molecular dynamics
second order perturbation theory
magnetic resonance imaging
ordinary differential equations
QM-MM quantum mechanics-molecular mechanics
MEMS microelectromechanical systems
NASA National Aeronautics and Space Administration
NCREN North Carolina Research and Education Network
NCSA National Center for Supercomputing Applications
NFS Network File System
NIH National Institutes of Health
NIST National Institute of Standards and Technology
NMR nuclear magnetic resonance
NSEC National Science and Engineering Center
NSF National Science Foundation
PDB Protein Data Bank
PDE partial differential equations
PB Poisson-Boltzmann
PD pattern discovery
PETSc Portable, Extensible Toolkit for Scientific Computing
PNNL Pacific Northwest National Laboratory
PSC Pittsburgh Supercomputing Center
PUNCH Purdue University Network Computing Hubs
QCD Quantum ChromoDynamics
QCDOC QCD on a chip
OCR for page 198
198
QM-MM
QSAR
QSPR
SNP
UNICORE
VNMRF
WTEC
APPENDIX H
quantum mecnanics-molecular mechanics
quantitative structure-activity relationship
quantitative structure-property relationship
single nucleotide polymorphisms
Uniform Interface to Computing Resources
Virtual NMR Facility
World Technology Evaluation Center, Inc.
Representative terms from entire chapter:
resonance nsec