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Systematics and The Origin of Species: On Ernst Mayr’s 100th Anniversary
Aphids, 84
Apple (Malus pumila ), 165
Aquifex aeolicus , 233 , 273
Arabidopsis lyrata ssp. petraea , 136
Arabidopsis thaliana , 338 , 341
Arbacia sp., 146 , 147 , 151-152
Archaea, 270 , 271 , 273
Archaeoglobus fulgidus , 271 , 272 , 273 , 278
Arctic charr (Salvelinus ), 78
Ardipithecus ramidus , 53
Arms-race evolution, 6
genetic, 20 ;
see also Inter-locus antagonistic coevolution
intersexual, 27-28 , 29 , 41
interspecific antagonistic coevolution, 25 , 28
in reproductive proteins, 113
Artificial chromosome libraries, 113
Artificial selection, directional asymmetry, 81
Ascomycota, 337
Aspergillus nidulans , 337
Association mapping, 287 , 288 , 302
Assortative mating, 156 , 311
Australian grassfinches. See Poephilia
Australian grasshoppers (Morabinae), 50
Australopithecus
afarensis , 53-54
ananmensis , 53
Autopolyploidy, 49
Avian speciation
allopatric, 96 , 97 , 98 , 101-102 , 103-104 , 145
behavioral factors, 96 , 102 , 103 , 106 , 157
bottlenecks, 96
chicken genome project, 95 , 97 , 110 , 111 , 112 , 113
coloration, 157
cryptic mate choice and, 102 , 104 , 106 , 111-113
delimitation, 96 , 97-101
developmental recombination, 75
diagnosability, 97-98 , 99
divergence, 98 , 99 , 103
ecological selection, 96 , 102 , 103 , 104
environmental factors, 83
fast-X evolution, 109-110
gene trees, 98-101
genealogical congruence, 99-101
genetic incompatibilities, 95 , 96 , 97 , 107
habitat-dependent selection, 103 , 104
Haldane’s rule, 105 , 107-109 , 110
hierarchy in, 157
hybridization, 102 , 104 , 105 , 107-109 , 110-111
internal factors, 96
intraspecific niche polymorphism, 103
large X(Z)-effect, 105 , 109
learning, 96 , 103 , 104-105
mimicry, 105 , 106
molecular research, 95 , 96
morphological adaptations, 99 , 101 , 103 , 104 , 157
parapatric, 102
phylogeographic patterns, 101-103 , 105 , 113
plumage, 102 , 103-104 , 109 , 111 , 157
Poephilia finches, 98-99
reinforcement, 95 , 96 , 97 , 110-111
reproductive character displacement, 103-104
and reproductive isolation, 84 , 95 , 97 , 101-105 , 106 , 107 , 110-111
reproductive proteins and, 111-113
sea urchins compared, 157
sex chromosomes and, 105-111
sexual conflict, 112-113
sexual imprinting, 96 , 104-105 , 106
sexual selection, 91 , 95 , 96 , 102 , 107-109 , 111 , 157
Solomon Islands, 96
song and, 101-105 , 109 , 111
species trees, 99-100
sperm competition, 111 , 112-113
sympatric, 91 , 96-97 , 102 , 103-105
Ayala, Francisco J., 6 , 46-68
B
Baboons, 76
Bacillus halodurans , 273
Bacillus subtilis , 272 , 273 , 336 , 342
Bacteria
artificial chromosome libraries, 113
barrier to gene exchange, 234-235
base composition analysis, 231-232
clonal evolution, 269 , 270 , 272
defining species, 236-238
determinants of gene exchange, 234-236
gene replacement, 234
