Separation processes—the production of two or more streams that are different in composition from that of the feedstock—are ubiquitous. They can operate on the smallest amounts of matter that consist of more than one atomic or molecular species or on the scale of the cosmos, where atoms and subatomic fragments are separated by the action of gravitational and other fields. Around the world, separation processes are building blocks for a wide range of industrial and environmental processes that impact society broadly and in many ways. For example, chemical separations are essential for the following purposes:
Removal of toxic substances like mercury from the flue gases of coal-fired power plants and removal of a range of organic and inorganic pollutants from wastewater streams.
Removal of the greenhouse gas carbon dioxide from power plant flue gases.
Recovery of very dilute but highly radioactive cesium-137 from nuclear-waste streams (NRC, 2000).
Separation of nitrogen, carbon dioxide, water, and other contaminants in gas from natural gas wells, coal bed methane wells, and landfills so that the methane can be added to the interstate pipeline system.
New separation applications to accommodate the commercialization of green products.
Production of potable water in many developing countries.
Purification of a growing number of new drugs from their chiral (mirror-image) compounds, which can in many instances be highly toxic.
The energy requirements to achieve the separated products are substantial, however, and come at a time when we can least afford it, with sometimes negative environmental consequences that can no longer be ignored. In the mid-1990s, separation processes in the chemical industry alone consumed about 7 percent of the total energy used in the United States (NRC, 1998); separation processes used in
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5
The Potential Impact of HECC in Chemical Separations
INTRODUCTION
Separation processes—the production of two or more streams that are different in composition from
that of the feedstock—are ubiquitous. They can operate on the smallest amounts of matter that consist of
more than one atomic or molecular species or on the scale of the cosmos, where atoms and subatomic
fragments are separated by the action of gravitational and other fields. Around the world, separation
processes are building blocks for a wide range of industrial and environmental processes that impact
society broadly and in many ways. For example, chemical separations are essential for the following
purposes:
• Removal of toxic substances like mercury from the flue gases of coal-fired power plants and
removal of a range of organic and inorganic pollutants from wastewater streams.
• Removal of the greenhouse gas carbon dioxide from power plant flue gases.
• Recovery of very dilute but highly radioactive cesium-137 from nuclear-waste streams (NRC,
2000).
• Separation of nitrogen, carbon dioxide, water, and other contaminants in gas from natural gas
wells, coal bed methane wells, and landfills so that the methane can be added to the interstate
pipeline system.
• New separation applications to accommodate the commercialization of green products.
• Production of potable water in many developing countries.
• Purification of a growing number of new drugs from their chiral (mirror-image) compounds,
which can in many instances be highly toxic.
The energy requirements to achieve the separated products are substantial, however, and come at
a time when we can least afford it, with sometimes negative environmental consequences that can no
longer be ignored. In the mid-1990s, separation processes in the chemical industry alone consumed
about 7 percent of the total energy used in the United States (NRC, 1998); separation processes used in
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0 THE POTENTIAL IMPACT OF HIGH-END CAPABILITY COMPUTING
other industries, while difficult to quantify from an energy-use standpoint, probably added one to several
percentage points to that number. About 60 percent of the total energy requirements of the chemical and
petroleum processing industries are consumed by separation processes (DOE, 2005). Capital investments
in separation processes are also a very important factor, with 40-70 percent of the total investments
in various separation-intensive industries being consumed by these processes (Humphrey and Keller,
1997). Given that separation processes consume so much energy, it is clear that they also contribute very
significantly to the nation’s output of greenhouse gases. Thus for three reasons—energy use, investment
costs, and environmental considerations—the incentives to improve these processes, as well as to invent
and develop new ones, are very great.
Box 5-1 portrays both the breadth of the separations field and the large number of disparate industries
in which these processes are applied. Most chemical separation processes are based on thermodynamic
equilibrium considerations. When, for example, a liquid stream containing two or more components is
heated and forms a vapor phase in contact with the liquid, at least a partial separation of the components
is possible if the resulting two phases at equilibrium have different compositions. Distillation is highly
effective at separating compounds based on differences in their relative volatilities. From a design point
of view, distillation-based processes are favored not only because their mechanical simplicity often leads
to low investment costs but also because their design requires a much smaller set of phase-equilibrium
data than all other separation options to quantify and optimize the efficiency of the separation. This fact
accounts in large part for the historic preference for distillation over alternative methods.
Distillation, because it requires that the mixture be repeatedly vaporized and condensed, nonethe-
less consumes tremendous amounts of energy. Historically, energy consumption and its concomitant
carbon dioxide release were not deemed to be of great concern, so chemical industries tended to design
BOX 5-1
Major Separation Processes and Industries
That Depend Heavily on Chemical Separations
Separation Processes
Distillation Membrane-based Filtration
Solvent extraction crystallization Bubble/foam fractionation
Supercritical gas extraction Ion exchange Electrodialysis
Gas and liquid adsorptions Drying Liquid chromatography
Gas absorption
Industries Served
Organic and inorganic Electronic products Industrial, municipal, and
chemical production Food processing agricultural waste
Polymer production Biochemical products treatment
Petroleum refining Biofuels production Hospitals and other
Pharmaceutical production Advanced biotech health-care entities
Ore, coal, oil, and gas products Homeland security
extraction and cleanup
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THE POTENTIAL IMPACT OF HECC IN CHEMICAL SEPARATIONS
TABLE 5-1 Examples of Mass-Separating Agents and Their Applications
Mass-Separating Agent Application
Zeolite molecular sieve Oxygen from air, hydrogen recovery, isomer separations, glucose-fructose separation,
CO2 removal from gas streams, water removal from ethanol
Activated carbon Removal of trace organics from water and air, of color from petroleum fractions, and of
odor and taste bodies from water
Ion exchange resin Removal of specific ions from various, usually aqueous, streams
Functionalized solvent Separation of derivatized organics from simpler organics
Water Separation of ions and polar organics from organic phases
Polymer membrane Nitrogen from air, hydrogen recovery, water removal from gases, water purification, CO2
recovery, desalination, biological materials separations
Filter Removal of solids from gases and liquids
Flocculating agent Concentration of fine particles and biological agents in aqueous streams
separation systems based on distillation if it was a viable option, turning to other options only if it was
not. This approach remains dominant, even though most of the alternatives to distillation would require
less energy and produce less CO2. Given that distillation is by far the most common separation process,
used in as much as 80 percent of all the chemical separations listed in Box 5.1, optimization of phase
equilibria will remain an important grand challenge for the chemical separations industry.
It is also true that distillation is sometimes not an effective option. Instead, mass-separating agents
(MSAs)—solvents, absorbents, adsorbents, membranes, and so on—are often added to amplify the sepa-
rating capability for these more intractable systems, while potentially providing for more economical,
environment-friendly solutions. Some examples of MSA-based processes are given in Table 5-1, which
we amplify by focusing on two examples of their use that have broad societal implications.
Example 1: Pure Oxygen from Air
Even though oxygen is already produced inexpensively on a massive scale, the number of uses and
overall volume produced could grow substantially if its price were cut even more. Some of the existing
and potential applications include the following:
• Feeding oxygen instead of air to power plant furnaces to reduce the volume of flue gas produced
and to increase the percentage of carbon dioxide, sulfur oxides, and nitrogen oxides in the flue
gas, dramatically reducing the cost of their recovery. Whether this use comes about is highly
dependent on the need to sequester the carbon dioxide.
• Feeding oxygen to gasification reactions such as occur in next-generation, integrated gasification
combined cycle (IGCC) coal-based power plants, which may be the wave of the future.
• Feeding oxygen instead of air to aerobic waste-treatment processes, thereby reducing equipment
size and costs.
• Feeding oxygen to a large number of organic oxidation processes to improve selectivities and
reduce energy costs.
The savings would have to be larger than the capital and energy costs of producing the oxygen in
order for these applications to be realized and grow. The secret to lowering oxygen costs would appear
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THE POTENTIAL IMPACT OF HIGH-END CAPABILITY COMPUTING
to be the discovery of new MSAs that can operate at temperatures and pressures that make it possible to
use waste heat as the energy source. This strategy is already being tested in an IGCC pilot plant with a
new technology—a ceramic membrane operating at about 800°C—which makes it possible to use waste
heat from the furnace as the sole energy source for the air separation. The development of other MSAs
that could operate in a similar fashion for other processes could usher in a revolution in oxygen use.
Example 2: Separations of Chiral Compounds
Chiral compounds are isomers whose structures cannot be superimposed on each other. Because
they are similar in chemical composition to their mirror-image relatives, their thermodynamic properties
such as vapor pressure, solubilities, and other properties are quite similar, making it often very difficult
to separate them. The most common separation technique is to seed a melt of the two isomers with a
crystal of one of them, causing that isomer to precipitate out of solution preferentially. Furthermore, it
is almost always the case that, in nonbiological syntheses at least, chiral isomers are produced in equal
amounts. Unfortunately, biological systems such as the human body do react differently to the two iso-
mers, sometimes dramatically. For example, thalidomide, C13H10N2O4, a chiral isomer and a sedative,
produced major birth defects when the product being sold contained more than a negligible amount of
its chiral twin, which produced those defects. Nor is this an isolated problem. Naproxen, a popular pain
reliever today, has a chiral twin that is a liver toxin.
More and more, the fraction of new drugs coming on the market that are chiral is growing, and
they must undergo precise and virtually complete separations from their chiral twins to eliminate the
possibility that these twins might produce unfortunate side effects. What are needed are MSAs that
can precisely separate chiral isomers and make it possible to produce drugs of the proper chiral purity
much more easily and cheaply. However, even though separation systems that rely on the use of MSAs
are an important area of growth in the separations industry, the design of new MSA systems is severely
hindered by the lack of physical property data and novel design leads.
MAJOR CHALLENGES FACING CHEMICAL SEPARATIONS
There are three major challenges facing those concerned with the development of efficient chemical
separations:
1. How can we predict physical properties accurately enough to set the optimal conditions for sepa-
rating mixtures using distillation and MSA materials?
2. How can we design, construct, and mass produce MSAs with appropriately engineered three-
dimensional structures (when appropriate) that make it easier to do difficult separations rapidly
and efficiently?
3. How can we design overall separation systems that incorporate several individual separation units
for economically optimal separations of complex mixtures?
This list is based on several documents developed in recent years by the chemical separations commu-
nity. An NRC report (1998) was used as the starting point. Reports from the Chemical Industry Vision
2020 Technology Partnership1 and another NRC report (2003), which examined the broader question of
computational chemistry and materials science, provided insights into new challenges that are apparent
1See http://www.chemicalvision2020.org/library.html. Last accessed on July 25, 2008.
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THE POTENTIAL IMPACT OF HECC IN CHEMICAL SEPARATIONS
now but were not at the forefront at the time of the 1998 NRC study. Finally, the committee benefited
from presentations by Joan Brennecke (University of Notre Dame), Anne Chaka (National Institute of
Standards and Technology), and Jeffery Siirola (Eastman Chemical) at a small workshop in December
2006 (see Appendix B). From these sources, the committee developed the three major challenges listed
above.
Dimensions, operating temperature, and operating pressure of the individual units are determined
by vapor-liquid equilibrium data, the focus of Major Challenge 1, for both traditional distillation and for
optimizing new MSA materials. Major Challenge 2 focuses on determining the appropriate nanoscale
structures when MSAs are used and on the ability to predict interactions of the MSA components with
the chemicals to be separated. Major Challenge 3 is an overall operations research problem that deals
with optimizing the interplay of multiple separations processes to achieve high-performance separa-
tions systems of complex mixtures. It is important to emphasize that the three major challenges pertain
at very different spatial scales. Major Challenges 1 and 2 require a better understanding of molecular
interactions within gases, liquids, and solids; Major Challenge 2 also deals with connecting particular
nanoscale characteristics to the manufacturing of engineered separation materials with dimensions on
the order of micrometers to meters. Finally, Major Challenge 3 addresses the design of systems on the
scale of tens of meters.
As progress is made on Major Challenges 1 to 3, we will be able to enlarge the space of options
available for purification systems and make design decisions that are closer to optimal. Looking to the
future, we will also create options for addressing critical separation technologies such as the following,
for which no acceptable separation schemes currently exist:
• Efficient recovery of highly dilute species from solutions.
• Recovery of CO2 from stack gas and automobile exhaust and sequestration of this compound.
• Development of less energy-intensive routes for producing oxygen.
• Efficient removal of sodium and other inorganics from water.
• Efficient separation of optical isomers to produce chirally pure products.
The major challenges of chemical separations are driven by the demand for the capabilities they
can enable. This is in contrast to the situation in astrophysics, evolutionary biology, and some aspects
of atmospheric science, where the motivation for overcoming the major challenges is the gap in under-
standing that must be filled to make scientific progress. The situation for chemical separations is much
like that in operational meteorology because in both cases a capability already exists. Pushing the
frontier amounts to improving and extending that capability, which in the case of chemical separations
has staggering implications for our ability to assume prudent stewardship of our environment while
maintaining our economic competitiveness. We now examine the three major challenges in chemical
separations in more detail.
Major Challenge 1: Accurately Predicting Physical Properties for Phase Equilibria
How can we predict physical properties accurately enough to set the optimal conditions for separat-
ing mixtures using distillation and MSA materials? Most current separations are equilibrium based. For
example, when a feedstock undergoes a phase change, the two resulting phases typically possess different
compositions, and a chemical separation has been achieved. In other cases, an MSA can be equilibrated
with a single phase and the MSA phase can selectively remove certain chemicals out of the original
phase. If the MSA is selective, what remains of the original phase will have a new chemical composition.
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THE POTENTIAL IMPACT OF HIGH-END CAPABILITY COMPUTING
Once again, a separation can be made. For systems such as these, the phase-equilibrium information
is absolutely essential for determining the ease or difficulty of obtaining the desired separation and for
predicting operating efficiencies and choosing among competing process designs. The field can utilize
both data measured experimentally and data predicted from computational and theoretical chemistry
methods that determine the energetics driving phase separations. Chemical separations is a field that
benefits from combining experimental and computational approaches to the acquisition of physical
property data, and this combined approach is anticipated to dominate for the foreseeable future.
For easy separations of binary mixtures such as water and ethylene glycol, no great accuracy is
required. But for mixtures that are not thermodynamically ideal, such as acetic acid and water or iso-
propanol and water, for mixtures that have boiling point differences of 10°C or less, and for mixtures with
three or more components, satisfactory definition of the phase equilibria can become an experimental
nightmare, opening a primary role for computational predictions. Seldom do feed mixtures have just
two components, and determining the appropriate mathematical representation of the experimental data
escalates dramatically in difficulty as the number of components increases, which suggests that more
research is needed for mathematical models and optimization. These predictions must be quite precise
to determine the system specifications and the energy requirements for the separation.
So why is industry not aggressively attacking Major Challenge 1? One reason is that quite a few of
the separation processes used in the petrochemical industry (which itself is a large fraction of the chemi-
cal industry) have historically been purchased from large engineering companies rather than developed
in-house. Rather than pioneering a new process, the companies that operate these plants tend to think
in terms of improving marketing, logistics, and supply chains as ways to differentiate themselves and
increase their profitability. In addition, training and education in computational chemistry and math-
ematical optimization are not well-integrated into the chemical engineering and chemistry curriculum,
thus limiting the extent to which methods and algorithms can inform optimality of phase equilibria and
process operation.
However, it is likely that these accepted business practices will change in the near future if a green
chemical revolution really takes hold. The separation requirements for a green product are normally
greater than for a competing conventional product because of the greater complexity of green raw
materials, the greater incidence of nonideal mixtures, and the desire to reduce the energy costs associ-
ated with those nonideal mixtures. The advantage of being first in the green market will probably drive
some companies to begin addressing Major Challenge 1 as a way of entering that market while control-
ling costs. And once some companies have made that investment, the competitive landscape could shift
quickly to favor the companies with stronger computational capabilities and resources.
Major Challenge 2: Designing and Producing MSAs for Difficult Separations
How can we design, construct, and mass produce MSAs with appropriately engineered three-
dimensional structures (when appropriate) that make it easier to do difficult separations rapidly and effi-
ciently? The chemical structure of an MSA will determine its physical properties, the nature and degree
of interactions with other compounds, and, ultimately, its suitability for a given application. Accurate
prediction of the properties of liquid MSAs used in extraction systems will allow engineers to design such
systems. For the solid MSAs used in adsorption and membrane systems, the three-dimensional structure
of the material is also of importance in determining its potential to accomplish the desired separation
efficiently. We must also evaluate how amenable those potential MSA structures are to efficient and
accurate production. The structures can be important not only because of their inherent thermodynamic
equilibrium selectivity but also because of their various hydrodynamic and mass-transfer qualities, which
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THE POTENTIAL IMPACT OF HECC IN CHEMICAL SEPARATIONS
can increase separation efficiencies. At present we have only a limited understanding of the relationship
between structure and separation selectivity and efficiency.
As an example of unexploited opportunities from new MSAs, consider metalorganic framework
materials (MOFs), a class of materials that is currently attracting much attention for their selective
adsorption of a vast array of solutes arising from the large number of possible MOF structures. MOFs
have potential for use in many different applications, including gas storage, separations, catalysis, and
sensors.2 MOFs have been shown to have some of the highest surface areas (for example, 4,900 m 2/g)
reported for any material to date, making their separation capacities quite large. Experimental charac-
terization of the most promising MOF materials—to understand how adsorption and diffusion of the
materials to be separated correlate with structural features such as pore size, surface area, and void
volume—is time consuming, and computational chemistry can suggest which novel structures are the
most promising candidates for that experimental characterization. Computational chemistry in this case
guides more rational design improvements for existing MSAs and de novo design of new MSAs for
separations with less stringent accuracy requirements than those encompassed by Major Challenge 1.
Major Challenge 3: Designing Optimal Separation Systems with Multiple Separation Units
How can we design overall separation systems that incorporate several individual separation units for
economically optimal separations of complex mixtures? Once a separation scheme has been proposed,
determining the efficiency of the separation, the optimum operating conditions for each unit, and the
sizing of the units shown and the connecting piping is rather straightforward if we have a good under-
standing of the physical properties of the chemicals or mixtures and of the structures and performance
of any MSAs used in the process. Yet, for any desired separation, a tremendously large number of pos-
sible separation schemes exist, which might employ any combination of the processes described in Box
5-1. Determination of which processes to employ and in what order is the responsibility of the process
engineer. The current state of the art relies heavily on the experience of the process engineer and on
rough rules of thumb (for example, if distillation works, use it). The number of solutions to this problem
is very large, with the best solution being influenced by value judgments on cost, waste produced, time
required, safety, and so on.
Major Challenge 3 consists of two related but different problems. In the determination of the opti-
mum process system to be used to make a given product (or system of products), one must (1) determine
all possible systems to be considered and then (2) evaluate which of the available solutions is optimal
based on the design criteria.
While both problems are difficult, the community’s progress in systematically attacking the second
problem seems more advanced. Many chemical engineering groups in industry and academia are strong
in computational modeling of processes to enable their design, optimization, and control. Once a pro-
cess engineer has roughed out a proposed multiscale system, the tools and expertise exist to analyze its
performance and then optimize the design.
Unfortunately, before we can even talk about best solution for a desired chemical separation, we need
a method for addressing the first problem, that of generating all the possible options to be evaluated.
Currently, there is no clear algorithm for methodically surveying the space of design options, although
the best process designers seem to have good intuition in this regard. For instance, an experienced process
engineer can create multiple distinct processes for achieving some common separations, not all of which
2See, for example, Cho et al., 2006; Dinca et al., 2006; James, 2003; Kitagawa et al., 2004; Latroche et al., 2006; Matsuda
et al., 2005; Millward and Yaghi, 2005; Mueller et al., 2006; Pan et al., 2006; Panella et al., 2006; Rosseinsky, 2004; Snurr et
al., 2004; and Wang et al., 2002.
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THE POTENTIAL IMPACT OF HIGH-END CAPABILITY COMPUTING
would be obvious to a novice (or an algorithm). If an algorithm could be developed to methodically
scan the design space—presumably drawing on a combination of expert knowledge, machine learning,
experimental data, and computational simulations—an optimal design could in principle then be found
through local or global optimization techniques if sound models for cost functions were defined. The
number of dimensions in the design space and the complexity of some of the component simulations
suggest that many such system optimization problems could require HECC.
This is a long-term challenge for the industry and for computation. Little published research has
appeared in this area, and the challenge remains at a very early stage of conceptualization. And there is,
at present, little economic incentive to attack Major Challenge 3, because chemical companies are able
to stay competitive without investing in new methods of process design. If appropriate algorithms can be
developed that systematically create a library of options from which an optimum solution will be drawn,
significant advances in the design and construction of efficient systems will surely be realized.
POTENTIAL IMPACTS OF HECC FOR CHEMICAL SEPARATIONS
There are numerous examples of computational chemistry leading to new understanding about the
behavior of chemicals in separations systems. Examples are shown in Box 5-2. Computation can play
the vital role of informing the experimental plan and focusing the expensive and time-consuming experi-
ments on the precise set needed for a given design. Further, it has many potential advantages over the
experimental evaluation of material properties, including these:
• Safe determination of properties for chemical species that are highly toxic or highly reactive,
or both.
• Determination of properties for chemical species that have not yet been synthesized or purified.
• Rapid prediction of properties for a wide range of chemical compounds.
• Inexpensive determination of relative properties.
• Fast screening of potential solvents or MSAs.
Computational approaches have great potential for facilitating more progress on Major Challenges
1 and 2. Because simulations of molecules of industrial importance and of realistic systems are compu-
tationally demanding, it is likely that HECC resources will be required. HECC enables more accurate
predictions of properties, which can lead to gains in efficiency and cost, whether through more precise
design of thermal-energy-based separations (for example, distillation) or the use of an appropriate
MSA. It also can expand the range of chemical and parameter options being evaluated. For example,
a profoundly improved MSA for the selective removal of oxygen from air is much more likely to
be discovered using a computational approach rather than an experimental one. Typically, design of
thermal-energy-based separations or of new MSAs is based on the characteristics of the best-known
materials available to date. Modest changes to the known chemistry might bring small improvements
in performance, but such incremental approaches will not bring true breakthrough technology. Break-
throughs are likely to come when examining some entirely unexplored region of parameter space.
HECC is ideally suited for mapping wide expanses of parameter space and highlighting potentially
exciting regions. The HECC-developed map can then be used to direct the design of next-generation
MSAs ripe for experimental evaluation.
Major Challenge 3 would be critically dependent on HECC if the cost model and parameter space
can be defined so that well-developed optimization and machine learning algorithms can be applied.
But, as noted above, there is little movement to attack that challenge.
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THE POTENTIAL IMPACT OF HECC IN CHEMICAL SEPARATIONS
BOX 5.2
Examples of Computational Chemistry Enabling Improved Understanding
of the Behavior of Chemicals in Separations Systems
• Phase behavior. Prediction of phase behavior of water and small organic molecules. This
understanding is essential for the design of separation systems based on thermodynamic
interactions, such as distillation and extraction. See, for example, Rablen et al., 1998.
• Drug design. The design of new pharmaceuticals has been significantly impacted by advance-
ments in computational chemistry. Today, computational chemistry can help predict the spe-
cific structures of new pharmaceuticals based on the molecular properties of specific target
molecules (Jorgensen, 2004). Additionally, it can be used to refine structures which have been
discovered using experimental methods. This coupling of computation and experimentation
can lead to new materials with superior properties (Martin et al., 1993).
• Materials screening. Computational chemistry provides a method for fast and effective screen-
ing methods for new drugs, catalysts, and materials. It allows for evaluation of a much broader
phase-space than would be possible with experiments alone (Walters et al., 1998).
• Materials design. Design of new solid structures capable of use as MSAs. See, for example,
Lipkowitz (1998).
• Design of microporous solids. The design of microporous solids with controlled pore size, vol-
ume, and surface area is of tremendous importance in fields such as adsorption and catalysis.
Férey et al. (2005) describe the use of targeted chemistry and computational design to create
a crystal structure with very large pore size and surface area.
• Industrial success stories. Westmoreland et al. (2002) cite the following as examples of
notable industrial successes in the use of computational chemistry:
— Rhône-Poulenc used quantum mechanical calculations of a Flory χ-parameter and relative
reactivities in developing an antiscratch additive for polyurethane coatings.
— Rhône-Poulenc used computation to determine that it would not be possible to develop a
material to compete with its competitor using a nylon basis, a valuable negative result.
— Lubrizol used a QSPR model for gasoline additive formulation to reduce testing costs by
one-third for predicting intake valve deposits in BMW, Ford, and Honda engines.
— Dow estimated that each ∆Hf calculation saved the company $50,000 in testing costs in
1996 and over $100,000 in 2000.
— Mitsubishi Chemicals reports that 5 percent of the patents from its Yokohama facility involve
some computational modeling.
To successfully address Major Challenges 1 and 2 requires building on the capabilities of computa-
tional chemistry, which now include calculations at the molecular scale with algorithms based on quan-
tum chemical theories and classical analogs that evaluate the energetics of molecular conformations, as
well as statistical mechanical methods that sample those conformations consistent with thermodynamic
variables such as temperature and pressure. The general strategy typically employed in computational
chemistry is to combine these methods based on the following diagram:
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THE POTENTIAL IMPACT OF HIGH-END CAPABILITY COMPUTING
Quantum chemistry calculations ‡ Classical empirical force fields
Ê Â
Statistical mechanical sampling
‚
Phase diagram
The primary uses of quantum chemistry calculations are to calculate for model chemical compounds
the relative energies of different molecular conformations—the charge density descriptions from which
one derives partial atomic charges—and the intermolecular interaction energies. All of these calculated
quantities can then be used to develop the empirical force fields, which can approximate the clas-
sical forces on all the atoms or molecules being studied. Because this force-field calculation is less
expensive computationally than a full-fledged quantum calculation of the entire system, it is the more
feasible approach for larger and more complicated systems. Furthermore, it is assumed that the quantum
mechanical results for a given compound are still valid when that compound is part of a larger molecule,
although it is recognized that this is not always a good approximation. This problem of transferability
is most limiting when electronic structure calculations are transformed into empirical classical force
fields. In either case, once the quantum or classical results have been validated against experimental data,
the resulting energetic models of an MSA material or of the chemicals in a thermal-energy-based unit
process feed into statistical mechanical simulations. Statistical mechanics provides a solid theoretical
foundation for defining equilibrium and dynamical sampling schemes of these molecular conformations,
thus allowing the generation of a global minimum structure, a phase diagram, absorption probabilities,
or transport properties such as diffusion, all of which are needed by the engineer or scientist intent on
developing new chemical separation schemes.
A sweet spot for such methods at present is when qualitative predictions suffice for identifying phase
equilibria thermodynamic parameters or promising MSAs to investigate experimentally. For example,
using molecular simulations, the nitrogen adsorption preferences within selected MOF materials known
as IRMOF-1 and IRMOF-16, shown in Figure 5-1, were predicted. The calculations predicted that
nitrogen prefers to associate with only the corner regions of IRMOF-1, while for IRMOF-16 it associates
with not only the corners but also the faces of the benzene rings. Thus, experimental efforts would be
steered toward IRMOF-16 because it is predicted to have greater nitrogen adsorption rates and capaci-
ties. When successfully executed, such computational modeling can direct experimental programs so
that highly effective MSAs can be produced with a minimum of time-consuming experimentation.
In other cases, qualitative insight is not enough and quantitative predictions are necessary. In order
for computational chemistry to develop predictive capabilities good enough to overcome Major Chal-
lenges 1 and 2, the following are needed:
• Scalable algorithms for quantum electronic structure calculations.
• Greatly improved classical force-field accuracy.
• Improved statistical sampling via molecular dynamics and Monte Carlo methods.
• Extensive validation studies on resulting phase equilibria and MSA structures.
• Training and education of the next generation of computational chemists and chemical
engineers.
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THE POTENTIAL IMPACT OF HECC IN CHEMICAL SEPARATIONS
Fig. 5.1.eps
FIGURE 5-1 Grand Canonical Monte Carlo simulation at 77 K of the adsorption of nitrogen within the unit cell
of two MOF materials. IRMOF-1 (top) is represented by metal atoms at the corners of the unit cell connected
by a -linker. IRMOF-16 (bottom) consists of metal atoms at the corners of the unit cell connected by a
-linker. The calculations show that the different MOF materials have different capacities for ni-
trogen separation depending on the linker chemistries. While nitrogen is concentrated only at the metal sites of
IRMOF-1, it can absorb at both the metal sites and linker aromatic rings in IRMOF-16. These calculations suggest
further MSA designs without costly experimentation. Red is higher density—that is, the molecule was found at
that location a relatively large number of times over the course of the simulation—with orange denoting a lower
density, yellow being lower still, and blue signifying that no molecules were predicted at those locations.
CURRENT FRONTIERS OF HECC FOR CHEMICAL SEPARATIONS
Algorithms for Quantum Electronic Structure Calculations
The 1998 Nobel prize in chemistry went to John Pople for his development of computational
methods in quantum chemistry, including the mean field approximation of Hartree-Fock (HF) methods
and electron correlation methods that enable increasing levels of accuracy, and to Walter Kohn for his
development of an alternative approach to electronic structure, known as density-functional theory
(DFT). The Nobel prize press release emphasized that “as well as producing quantitative information
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on molecules and their interactions, [computational chemistry] also affords deeper understanding of
molecular processes that cannot be obtained from experiments alone.” 3
Quantum chemistry is based on reformulating the Schrödinger eigenvalue equation into a large set of
algebraic equations expanded in some convenient mathematical basis set—typically Gaussianfunctions—
and the development of well-defined approximations to electron-electron interaction potentials. HF
uses a mean-field approximation to treat electron interactions, such that the computational complexity
scales quadratically with molecular size, although the algebraic steps of matrix diagonalization scales
cubically to dominate the computational complexity for a large system. DFT offers the advantage of
similar computational scaling complexity while treating electron correlation beyond the HF mean-field
approximation. It is important to emphasize that because DFT captures only certain types of electron
correlation, the quality of DFT calculations is still under debate. This is especially the case for weak
nonbonded interactions, and the development of new DFT functionals is an active area of research.
Routine calculations for these methods are now completely feasible for molecules with hundreds of
atoms, and heroic calculations for ~1,000 atoms are possible on the most powerful computers and with
a good deal of computing time.
A feasible and often more robust alternative to post-HF methods is the Moller-Plesset Perturbation
(MP2) series to describe electron correlation beyond the mean-field HF reference. MP2 refers to the
mathematical model that perturbs the HF reference to include electron correlations up to second order.
The MP2 method scales with the 5th power of system size because the formulation of MP2 uses
delocalized molecular orbitals that arise from standard HF calculations. However, the molecular orbitals
can be localized, and there has been a great deal of progress toward developing a “local-MP2” method
that scales only quadratically with molecular size and comes to within a few percent of reproducing the
exact MP2 energy for a given basis set, making the computation of molecules comprising hundreds of
atoms completely feasible.
The gold standard of quantum chemistry calculations is coupled cluster methods, a general formula-
tion with high levels of electron correlation that can use any orbital reference. While these theoretical
models have been formulated into algorithms, they have severe scaling requirements (scaling at least
with the 7th power of system size), which have traditionally limited their applications to very small
system sizes (tens of atoms).
The post-HF methods provide a good to very good level of accuracy with regard to relative confor-
mational stabilities and barriers, charge densities, and weak intermolecular interactions. They provide
excellent input for developing empirical force fields for many classes of chemical compounds. HECC
will make it less expensive to perform electronic structure calculations and will enable the calculation
for much larger molecules of importance when the physics is well described by HF/DFT or MP2 levels
of theory, on the condition that these algorithms can be deployed on massively parallel architectures,
which is a limiting factor since the algorithms are still only weakly parallelizable. For classes of more
complex materials, current capabilities of these methods may themselves inherently limit the accurate
calculation of phase equilibria data, and coupled cluster methods are to be preferred.
Improved Accuracy of Molecular Mechanics Force Fields
Empirical force fields derived from electronic structure calculations and experimental data, coupled
to classical molecular dynamics or Monte Carlo sampling schemes, are the main component of all
computational studies of materials chemistry to date. Overall, they can be the weak link in accurate
3Available at http://nobelprize.org/nobel_prizes/chemistry/laureates/1998/press.html.
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THE POTENTIAL IMPACT OF HECC IN CHEMICAL SEPARATIONS
determination of phase equilibria data through computation if they have not been sufficiently validated
against experiment. For example, the physical properties of homogeneous liquids of certain classes
of molecules, such as Lennard-Jones fluids or liquid water, are qualitatively and even quantitatively
well described by empirical molecular mechanics force fields based on productive collaborative work
between theory and experiment over the last several decades. The challenge of using empirical force
fields in the chemical separations industry is that each new thermal-based separation or MSA material
requires empirical force field development based on an affordable electronic structure calculation, and
experimental validation is then required in order for those force fields to be usefully deployed.
The challenge in constructing a force field from quantum calculations lies in determining the form
of the mathematical function. One must strike a balance between enough complexity to accurately
describe the fundamental interactions of matter on the one hand and simplifications that decrease the
computational complexity on the other. For instance, approximate classical models represent bonds and
angles as harmonic springs, dihedral angle conformations by a truncated Fourier series, pairwise non-
bonded interactions with a Lennard-Jones function, and electrostatic interactions between point charges
by Coulomb’s law. There are several empirical force fields of this type in use, and they are widely used
in industry and academic research settings.
Beyond the less-accurate two-body potentials described above, the most recent generation of
empirical energy functions incorporates the many-body effects of polarizability by modeling how the
electron density responds to an electric field that is generated by the condensed phase of a material
of interest. It is generally agreed that including polarizability into empirical force fields is necessary
for good quantitative agreement between simulations and experiments not at ambient conditions, for
representing realistic dynamics, and for simulating heterogeneous chemical systems of multiple compo-
nents. These many-body functional forms are typically more computationally expensive (3 to 10 times
as expensive as the simplest molecular mechanics force fields), making HECC even more necessary.
While the most recent generation of polarizable empirical energy functions provides some significant
improvement, important work remains in how to model the physics of charge transfer between separate
molecules and how to describe polarization anisotropy in fluctuating charge models. There are also
algorithmic issues to be addressed to achieve computational efficiency in Monte Carlo simulations and
extensions to arbitrary molecular systems.
However, the most fundamental expense in evaluating empirical force-field energies and deriva-
tives is due to the long-range coulombic forces. The accounting of long-range forces is best introduced
through the Ewald summation. Typical materials simulations periodically replicate the system in three
spatial dimensions, and this approach divides the long-range coulombic interactions into a short-range
part that is evaluated in real space (as a direct sum over atomic positions) and a long-range part evalu-
ated in reciprocal space. New formulations of Ewald algorithms scale as N log N once N exceeds about
1,000, so systems with tens of thousands of atoms may reasonably be handled on the most advanced
supercomputers.
Looking to the future, the new ab initio molecular dynamics approaches allow calculation of elec-
tronic structure on the fly, currently to an accuracy competitive with that of HF or DFT. Even though
these methods are in their infancy and are not feasible for the long timescales and large molecular sizes
that are needed for useful empirical force-field calculations, this capability will continue to grow over the
next several decades. The bottlenecks for this area are primarily model physics (greater accuracy than that
provided by HF and DFT), improved algorithms, and deployment on massively parallel architectures.
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Improved Statistical Sampling
Phase equilibria calculations involve direct evaluations of thermodynamic properties of the indi-
vidual phases at a series of state points to find where the temperature, pressure, and chemical potential
of the phases are equal. Because the direct computation of conformational and energetic properties is
so computationally expensive, as explained above, it is critical to be as efficient as possible in sampling
the state points. Addressing that need, extended system equations of motion and associated numerical
integrators have been developed that allow extensions from microcanonical ensemble dynamics to sam-
pling of states in the canonical ensemble (NVT) as well as the isobaric-isothermal (NPT) ensembles.
Based on a factorization of the evolution operator, a formal decomposition of the integration time step
allows bonds to be updated more often than angle bends, and angle bends more often than short-range
forces, and short-range forces more often than long-range forces. This formally correct multiple-time-
step integration has been shown to generate about an order of magnitude improvement in computational
efficiency in materials systems, although resonance artifacts can reduce this efficiency gain in practice.
The decrease in computer time results from the fact that the most expensive terms, the double sum over
atoms, need to be updated less often than local interactions. Calculations performed using multiple-
time-step integration methods in isothermal or isobaric-isothermal ensembles are very scalable. Each
time step results in a collective “move,” and parallelization can proceed using standard domain decom-
position paradigms. These are important considerations for phase equilibria calculations since large
systems are required to overcome finite-size effects and heterogeneous systems require significantly
longer equilibration times.
Probably the biggest breakthroughs in calculation of vapor-liquid and liquid-liquid phase equilibria
are the formulations of grand canonical Monte Carlo methods in terms of the Gibbs ensemble and semi-
grand canonical Monte Carlo methods developed in the 1980s and 1990s, allowing the determination of
phase equilibria in one simulation without the interference of an imposed phase interface. Furthermore,
once a single point on the coexistence curve is known, the rest of the curve can be calculated without
resort to additional free-energy calculations by integrating the Clausius-Clapeyron equation, although
care must be taken to avoid numerical instabilities. For solid-liquid phase equilibria, thermodynamic
integration based on paths with a known free energy reference state are well developed. Enhanced sam-
pling schemes and related methods are available that allow for efficient molecule exchanges between
phases in order to converge the Gibbs ensemble.
Progress on Major Challenge 3 involves a very different focus, namely mathematical optimiza-
tion research as a general approach for obtaining solutions to large nonlinear systems with numerous
local minima. Constrained optimization methods rely on the availability of sufficiently well-defined
constraints (supplied by the application expert) so that the desired solution is the only available mini-
mum, or one of few available minima, in the optimization phase of the algorithm. Alternatively, global
optimization techniques attempt to systematically search the parameter space based on a cost function
to find all low-lying minima, including the global energy minimum. The useful application of these
optimization strategies is computationally intensive since they typically require hundreds or thousands
of evaluations of a cost function (and of its derivative if available). These optimization approaches are
useful in many contexts, including atomic-level structure optimization of molecules in thermal-based
separations and MSA materials in Major Challenges 1 and 2 and designs for entire separation systems
that define Major Challenge 3. What distinguishes the usefulness of mathematical optimization in Major
Challenges 1 and 2 is that the cost functions and parameter space are relatively well defined in terms
of an objective function, while Major Challenge 3 has greater uncertainty in the nature and dimension
size of the mathematical model.
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THE POTENTIAL IMPACT OF HECC IN CHEMICAL SEPARATIONS
In summary, our current capabilities in computational chemistry for addressing Major Challenges 1
and 2 are sufficient for a class of materials and chemical systems important for some separations prob-
lems, and improvements in HECC, broadly defined, will surely and steadily enable additional advances
for these application areas, especially for larger molecular systems. However, advancing these methods
to new classes of materials will require a combination of new model physics, better-scaling algorithms
in quantum chemistry and statistical mechanical sampling, and deployment onto massively parallel
architectures. Major Challenge 3 currently is more narrowly focused on formulating cost function models
that can utilize the large array of mathematical optimization techniques.
OTHER ISSUES THAT LIMIT THE VALUE OF HECC TO CHEMICAL SEPARATIONS
Productive cooperation and dialogue between experimentalists and modelers is not as extensive
as it should be in order for computational approaches to contribute optimally to progress in chemical
separations. In particular, funding is lacking for experimental work to learn about phase equilibria in
fundamental systems, knowledge that could be used to validate computational models. A combined
computational/experimental strategy is critical. A good example of cooperation is the Industrial Fluid
Simulation Challenge, sponsored by the National Institute of Standards and Technology (NIST), in which
academic and industrial teams attempt to predict a range of thermodynamic and physical properties like
vapor-liquid equilibria, density, viscosity, vapor pressure, heat of mixing, and so on. However, after
four NIST Challenges, it is clear that there is a long way to go before computation can reliably predict
various properties for a disparate set of chemical species.
Incentives are needed to encourage collaboration between experimentalists and researchers perform-
ing molecular simulations in order that computational models can be developed, validated, and run more
efficiently. Within the research community in general, not much effort is being put into validating the
results of atomistic scale models with experimental data. Part of the problem is that experimentalists have
incentives to pursue experiments that are project-specific rather than those that will expand fundamental
knowledge. Indeed, the measurements that would be most helpful in developing and verifying compu-
tational methods are often perceived as having little practical value for the experimentalist or funding
agency. Cooperation between industry, academia, and government could create the needed incentives.
As noted in the preceding section, education and training are important if the chemical separations
field is to profit from the potential of HECC. Developing and applying advanced simulation capabilities
requires specialized cross-disciplinary skills; this topic is addressed in more detail in Chapter 7 because
it affects nearly every field that relies on computational science and engineering. In the case of chemi-
cal separations in particular, these broad computational skills must be supported on the foundations of
theoretical chemistry and mathematics and are vital to overcoming all three challenges explored in this
chapter.
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