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In the Light of Evolution, Volume II: Biodiversity and Extinction (2008)
National Academy of Sciences (NAS)

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. "8 Resistance, Resilience, and Redundancy in Microbial Communities--STEVEN D. ALLISON and JENNIFER B. H. MARTINY." In the Light of Evolution, Volume II: Biodiversity and Extinction. Washington, DC: The National Academies Press, 2008.

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In the Light of Evolution: Volume II—Biodiversity and Extinction

These studies did not suggest that broad taxonomic groups are more or less sensitive to disturbances than narrow taxonomic groups. This pattern suggests that taxonomic breadth is not related to whether a compositional shift was detected. Perhaps more surprisingly, there are no patterns suggesting that methodology influences whether a compositional change was detected. In addition, we were not able to discern whether particular taxonomic or functional groups are more or less sensitive to particular disturbance types. Overall, the low number of studies observing a resistant microbial composition hinders our ability to recognize any patterns among these studies. However, we can conclude that microbial composition is generally sensitive to disturbance.

RESILIENCE OF MICROBIAL COMPOSITION

Even if microbial composition is sensitive to a disturbance, the community might still be resilient and quickly return to its predisturbance composition. A number of features of microorganisms, and in particular Bacteria and Archaea, suggest that resilience could be common. First, many microorganisms have fast growth rates; thus, if their abundance is suppressed by a disturbance, they have the potential to recover quickly. Second, many microbes have a high degree of physiological flexibility. This is famously the case for the purple nonsulfur bacteria, which can be phototrophs under anoxic conditions and heterotrophs under aerobic conditions. Thus, even if the relative abundance of some taxa decreased initially, these taxa might physiologically acclimate to the new abiotic conditions over time and return to their original abundance. Finally, if physiological adaptation is not possible, then the rapid evolution (through mutations or horizontal gene exchange) could allow microbial taxa to adapt to new environmental conditions and recover from disturbance. All of these arguments assume that abundance is reduced by a disturbance, but some microbial taxa may benefit from the new conditions and increase in abundance. Thus, in order for some taxa to recover in abundance, those that responded positively to the disturbance would also need to decrease in abundance to return the community to its original composition.

Few studies explicitly focus on the time course of microbial composition after a disturbance; instead, most focus solely on the sensitivity of composition. Consequently, we recorded the length of time between the application of the disturbance and when microbial composition was assessed for the studies in our sample. If composition is highly resilient, then one should be less likely to detect a compositional change as time from disturbance increases.

We compared the time from initial disturbance for those studies that found composition to be sensitive versus resistant. Generally, the tim-

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Front Matter (R1-R18)
Part I: Contemporary Patterns and Processes in Animals (1-4)
1 Ecological Extinction and Evolution in the Brave New Ocean--JEREMY B. C. JACKSON (5-26)
2 Are We in the Midst of the Sixth Mass Extinction? A View from the World of Amphibians--DAVID B. WAKE and VANCE T. VREDENBURG (27-44)
3 Patterns of Biodiversity and Endemism on Indo-West Pacific Coral Reefs--MARJORIE L. REAKA, PAULA J. RODGERS, and ALEXEI U. KUDLA (45-62)
4 Homage to Linnaeus: How Many Parasites? How Many Hosts?--ANDY DOBSON, KEVIN D. LAFFERTY, ARMAND M. KURIS, RYAN F. HECHINGER, and WALTER JETZ (63-82)
Part II: Contemporary Patterns and Processes in Plants and Microbes (83-84)
5 Species Invasions and Extinction: The Future of Native Biodiversity on Islands--DOV F. SAX and STEVEN D. GAINES (85-106)
6 How Many Tree Species Are There in the Amazon and How Many of Them Will Go Extinct?--STEPHEN P. HUBBELL, FANGLIANG HE, RICHARD CONDIT, LUIS BORDA-DE-ÁGUA, JAMES KELLNER, and HANS TER STEEGE (107-126)
7 Microbes on Mountainsides: Contrasting Elevational Patterns of Bacterial and Plant Diversity--JESSICA A. BRYANT, CHRISTINE LAMANNA, HÉLÈNE MORLON, ANDREW J. KERKHOFF, BRIAN J. ENQUIST, and JESSICA L. GREEN (127-148)
8 Resistance, Resilience, and Redundancy in Microbial Communities--STEVEN D. ALLISON and JENNIFER B. H. MARTINY (149-166)
Part III: Trends and Processes in the Paleontological Past (167-170)
9 Extinction as the Loss of Evolutionary History--DOUGLAS H. ERWIN (171-188)
10 Extinction and the Spatial Dynamics of Biodiversity--DAVID JABLONSKI (189-206)
11 Dynamics of Origination and Extinction in the Marine Fossil Record--JOHN ALROY (207-226)
12 Megafauna Biomass Tradeoff as a Driver of Quaternary and Future Extinctions--ANTHONY D. BARNOSKY (227-242)
Part IV: Prospects for the Future (243-246)
13 A Phylogenetic Perspective on the Distribution of Plant Diversity--MICHAEL J. DONOGHUE (247-262)
14 Phylogenetic Trees and the Future of Mammalian Biodiversity--T. JONATHAN DAVIES, SUSANNE A. FRITZ, RICHARD GRENYER, C. DAVID L. ORME, JON BIELBY, OLAF R. P. BININDA-EMONDS, MARCEL CARDILLO, KATE E. JONES, JOHN L. GITTLEMAN, GEORGINA M. MACE, and ANDY PURVIS (263-280)
15 Three Ambitious (and Rather Unorthodox) Assignments for the Field of Biodiversity Genetics--JOHN C. AVISE (281-296)
16 Engaging the Public in Biodiversity Issues--MICHAEL J. NOVACEK (297-316)
17 Further Engaging the Public on Biodiversity Issues--PETER J. BRYANT (317-328)
18 Where Does Biodiversity Go from Here? A Grim Business-as-Usual Forecast and a Hopeful Portfolio of Partial Solutions--PAUL R. EHRLICH and ROBERT M. PRINGLE (329-346)
References (347-394)
Index (395-414)