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Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California’s Bay–Delta

Committee on Sustainable Water and Environmental Management in the California Bay-Delta

Water Science and Technology Board

Ocean Studies Board

Division on Earth and Life Studies

NATIONAL RESEARCH COUNCIL
OF THE NATIONAL ACADEMIES

THE NATIONAL ACADEMIES PRESS

Washington, D.C.
www.nap.edu

Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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THE NATIONAL ACADEMIES PRESS
500 Fifth Street, N.W.
Washington, D.C. 20001

NOTICE: The project that is the subject of this report was approved by the Governing Board of the National Research Council, whose members are drawn from the councils of the National Academy of Sciences, the National Academy of Engineering, and the Institute of Medicine. The members of the panel responsible for the report were chosen for their special competences and with regard for appropriate balance.

Support for this study was provided by the Department of the Interior under contract no. 80221-A-G100. Any opinions, findings, conclusions, or recommendations expressed in this publication are those of the author(s) and do not necessarily reflect the views of the organizations or agencies that provided support for the project.

International Standard Book Number-13: 978-0-309-12802-5

International Standard Book Number-10: 0-309-12802-1

Additional copies of this report are available from the

National Academies Press,

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Photo of the California Bay-Delta on the cover is courtesy of David Policansky.

Cover was designed by Sharon Martin.

Copyright 2010 by the National Academy of Sciences. All rights reserved.

Printed in the United States of America.

Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
×

THE NATIONAL ACADEMIES

Advisers to the Nation on Science, Engineering, and Medicine


The National Academy of Sciences is a private, nonprofit, self-perpetuating society of distinguished scholars engaged in scientific and engineering research, dedicated to the furtherance of science and technology and to their use for the general welfare. Upon the authority of the charter granted to it by the Congress in 1863, the Academy has a mandate that requires it to advise the federal government on scientific and technical matters. Dr. Ralph J. Cicerone is president of the National Academy of Sciences.


The National Academy of Engineering was established in 1964, under the charter of the National Academy of Sciences, as a parallel organization of outstanding engineers. It is autonomous in its administration and in the selection of its members, sharing with the National Academy of Sciences the responsibility for advising the federal government. The National Academy of Engineering also sponsors engineering programs aimed at meeting national needs, encourages education and research, and recognizes the superior achievements of engineers. Dr. Charles M. Vest is president of the National Academy of Engineering.


The Institute of Medicine was established in 1970 by the National Academy of Sciences to secure the services of eminent members of appropriate professions in the examination of policy matters pertaining to the health of the public. The Institute acts under the responsibility given to the National Academy of Sciences by its congressional charter to be an adviser to the federal government and, upon its own initiative, to identify issues of medical care, research, and education. Dr. Harvey V. Fineberg is president of the Institute of Medicine.


The National Research Council was organized by the National Academy of Sciences in 1916 to associate the broad community of science and technology with the Academy’s purposes of furthering knowledge and advising the federal government. Functioning in accordance with general policies determined by the Academy, the Council has become the principal operating agency of both the National Academy of Sciences and the National Academy of Engineering in providing services to the government, the public, and the scientific and engineering communities. The Council is administered jointly by both Academies and the Institute of Medicine. Dr. Ralph J. Cicerone and Dr. Charles M. Vest are chair and vice chair, respectively, of the National Research Council.


www.national-academies.org

Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
×

COMMITTEE ON SUSTAINABLE WATER AND ENVIRONMENTAL MANAGEMENT IN THE CALIFORNIA BAY-DELTA*

ROBERT J. HUGGETT, Chair, Professor Emeritus,

College of William and Mary, Seaford, Virginia

JAMES J. ANDERSON,

University of Washington, Seattle

MICHAEL E. CAMPANA,

Oregon State University, Corvallis

THOMAS DUNNE,

University of California, Santa Barbara

ALBERT E. GIORGI,

BioAnalysts, Inc., Redmond, Washington

PATRICIA M. GLIBERT,

University of Maryland Center for Environmental Science, Horn Point Laboratory, Cambridge

CHRISTINE A. KLEIN,

University of Florida College of Law, Gainesville

SAMUEL N. LUOMA,

John Muir Institute of the Environment, University of California, Davis

MICHAEL J. MCGUIRE,

Michael J. McGuire, Inc., Santa Monica, California

THOMAS MILLER,

University of Maryland Center for Environmental Science, Chesapeake Biological Laboratory, Solomons, Maryland

JAYANTHA OBEYSEKERA,

South Florida Water Management District, West Palm Beach

MAX J. PFEFFER,

Cornell University, Ithaca, New York

DENISE J. REED,

University of New Orleans, New Orleans, Louisiana

KENNETH A. ROSE,

Louisiana State University, Baton Rouge

DESIREE D. TULLOS,

Oregon State University, Corvallis

NRC Staff

DAVID POLICANSKY, NRC Study Director, Scholar

LAURA J. HELSABECK, Deputy Study Director

STEPHEN D. PARKER, WSTB Director, Scholar

SUSAN ROBERTS, OSB Director

ELLEN A. DE GUZMAN, Research Associate

HEATHER CHIARELLO, Senior Program Assistant

*

Biographical information for committee members is in Appendix E. This project was organized and overseen by the NRC’s Water Science and Technology Board (lead) and Ocean Studies Board, whose rosters are in Appendixes B and C, respectively.

Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
×

Preface

California, like many states, faces challenges related to water. Much of the state is too dry to support many human activities, such as municipal and industrial water use and irrigated agriculture, without supplementing the natural water supply. It has done this through an extensive series of engineering projects that include reservoirs, canals, levees, and pumps, largely to move water from the more humid north to the more arid and densely populated south. Much of California’s natural surface-water supply flows into and through the Sacramento and San Joaquin watersheds into California’s Bay-Delta, and from there through San Francisco Bay into the ocean. The delta itself is a biologically diverse estuarine ecosystem, and is the main point of diversion for water that is transported to the south.

As California’s population and economic activity have increased, along with water diversions from the delta, conflicts over various water uses have increased as well, especially surrounding the bay-delta. Those conflicts have been brought to a head by restrictions on water diversions that have been required by two biological opinions, one by the U.S. Fish and Wildlife Service, covering delta smelt, and one by the National Marine Fisheries Service, covering salmon, steelhead, and sturgeon, to protect those fishes, which are listed as threatened or endangered under the federal Endangered Species Act. In addition, several recent dry years have exacerbated the situation. Conflicts over water are not new in California, but the current conflicts over the bay-delta appear to be unprecedented in their scale. Few parts of the state are unaffected by what happens to delta water.

Protecting all the listed species and preserving existing and projected uses of the region’s water is a serious challenge. The complexity of the problem and the difficulty of identifying solutions have been highlighted by a plethora of scientific publications and arguments, in which many qualified and distinguished experts have reached differing conclusions. Nobody disagrees that engineering changes; the introduction of many exotic species, the addition of contaminants to the system, and the general effects of an increasing human population have contributed to the fishes’ declines. There are, however, disagreements

Page viii Cite
Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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about the relative contributions of those factors and the appropriate remedies for them. This is the context in which the National Research Council was asked by Congress and the Department of the Interior to help resolve the issue by evaluating the scientific bases of the biological opinions. In response, the NRC appointed a special committee of experts to carry out a complex and challenging study in two phases.

In its first phase, the committee was tasked to focus on the scientific bases of the reasonable and prudent alternatives (RPAs) in the two biological opinions. The committee also assessed whether the RPAs might be in conflict with one another, as well as whether other options might be available that would protect the fishes with lesser impacts on other water uses. Finally, we were asked to consider the effects of “other stressors” on the fishes if sufficient time were available. The results of this first-phase analysis are the subject of this report. The committee did consider other stressors, but it did not evaluate them in depth. They will be more thoroughly addressed in a second report, scheduled to be published late in 2011, which will focus on broader issues surrounding attempts to provide more sustainable water supplies and to improve the ecological sustainability of the delta, including consideration of what ecological goals might be attainable.

The committee met in Davis, California for five days in January 2010. The committee heard presentations from representatives of federal and state agencies and a variety of other experts, and from members of several stakeholder groups and the public (see Appendix D). The information gathering sessions of this meeting were open to the public and widely advertised. The committee sought to hear from as many groups and individuals as possible within the time constraints. All speakers, guests, and members of the public were encouraged to provide written comments during and after the meeting. All presentations and written materials submitted were considered by the committee as time allowed. The committee thanks all the individuals who provided information.

This report was reviewed in draft form by individuals chosen for their diverse perspectives and technical expertise in accordance with the procedures approved by the NRC’s Report Review Committee. The purpose of this independent review is to provide candid and critical comments that will assist the NRC in making its published report as sound as possible, and to ensure that the report meets NRC institutional standards for objectivity, evidence, and responsiveness to the study charge. The review comments and draft manuscript remain confidential to protect the integrity of the deliberative process.

We thank the following for their reviews of this report: Joan G. Ehrenfeld, Rutgers University; Mary C. Fabrizio, Virginia Institute of Marine Science; Peter Gleick, Pacific Institute; William P. Horn, Birch, Horton, Bittner & Cherot;

Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
×

D. Peter Loucks, Cornell University; Jay Lund, University of California, Davis; Tammy Newcomb, Michigan Department of Natural Resources; and Andrew A. Rosenberg, Conservation International.

Although these reviewers provided constructive comments and suggestions, they were not asked to endorse the report’s conclusions and recommendations, nor did they see the final draft of the report before its release. The review of this report was overseen by Michael Kavanaugh, Malcolm Pirnie, Inc., who was appointed by the NRC’s Report Review Committee and by Leo Eisel, Brown and Caldwell, who was appointed by the NRC’s Division on Earth and Life Studies. They were responsible for ensuring that an independent examination of this report was conducted in accordance with NRC institutional procedures and that all review comments received full consideration. Responsibility for this report’s final contents rests entirely with the authoring committee and the NRC.

I am enormously grateful to my committee colleagues for their diligence, enthusiasm, persistence, and hard work. The schedule for the preparation of this report was short, and without everyone’s engagement, it could not have been completed. I also am grateful to David Policansky, Stephen Parker, Laura Helsabeck, Heather Chiarello, Ellen de Guzman, and Susan Roberts of the NRC staff for their efforts in facilitating the committee’s meeting and for their work in helping to get this report completed on schedule in the face of historic snowstorms.

California will continue to face great challenges in managing, allocating, and using water, including managing California’s Bay-Delta. We hope the committee’s reports can help in that difficult process.


Robert J. Huggett

Chair

Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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Page xiii Cite
Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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Acronyms and Abbreviations

AF Acre-feet

BA Biological Assessment

BO Biological Opinion

(C)DFG California Department of Fish and Game

(C)DWR California Department of Water Resources

C.F.R. Code of Federal Regulations

Cir Circuit Court (federal system)

CVP Central Valley Project

CVPIA Central Valley Project Improvement Act

DCC Delta Cross Channel

DOI (U.S.) Department of the Interior

DSM2 Delta Simulation Model II

EDT Ecosystem Diagnosis and Treatment

ESA Endangered Species Act

EWA Environmental Water Account

FMT Fall Midwater Trawl (survey)

FWS (U.S.) Fish and Wildlife Service

HORB Head of Old River Barrier

MAF Million acre-feet

M&I Municipal and Industrial

NAS National Academy of Sciences

NMFS National Marine Fisheries Service

NOAA National Oceanic and Atmospheric Administration

NRC National Research Council

OCAP Operations Criteria And Plan

OMR Old and Middle River

OSB Ocean Studies Board of the NRC

PTM Particle-Tracking Model

RBDD Red Bluff Diversion Dam

RPA Reasonable and Prudent Alternative

SWP State Water Project

TAF Thousand acre-feet

USBR United States Bureau of Reclamation

U.S.C. United States Code

USGS United States Geological Survey

VAMP Vernalis Adaptive Management Plan

WSTB Water Science and Technology Board of the NRC

X2 Contour line of salinity 2

Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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Suggested Citation:"Front Matter." National Research Council. 2010. A Scientific Assessment of Alternatives for Reducing Water Management Effects on Threatened and Endangered Fishes in California's Bay-Delta. Washington, DC: The National Academies Press. doi: 10.17226/12881.
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California's Bay-Delta estuary is a biologically diverse estuarine ecosystem that plays a central role in the distribution of California's water from the state's wetter northern regions to its southern, arid, and populous cities and agricultural areas. Recently, the Fish and Wildlife Service and the National Marine Fisheries Service required changes (reasonable and prudent alternatives, or RPAs) in water operations and related actions to avoid jeopardizing the continued existence and potential for recovery of threatened species of fish. Those changes have reduced the amount of water available for other uses, and the tensions that resulted have been exacerbated by recent dry years.

The complexity of the problem of the decline of the listed species and the difficulty of identifying viable solutions have led to disagreements, including concerns that some of the actions in the RPAs might be ineffective and might cause harm and economic disruptions to water users, and that some of the actions specified in the RPAs to help one or more of the listed species might harm others. In addition, some have suggested that the agencies might be able to meet their legal obligation to protect species with less economic disruptions to other water users.

The National Research Council examines the issue in the present volume to conclude that most of the actions proposed by two federal agencies to protect endangered and threatened fish species through water diversions in the California Bay-Delta are "scientifically justified." But less well-supported by scientific analyses is the basis for the specific environmental triggers that would indicate when to reduce the water diversions required by the actions.

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