Kimmerer, W. J., M. H. Nicolini, N. Ferm, and C. Peñalva. 2005. Chronic food limitation of egg production in populations of copepods of the genus Acartia in the San Francisco Estuary. Estuaries 28:541-550.
Kimmerer, W. J., and J. J. Orsi. 1996. Causes of long-term declines in zooplankton in the San Francisco Bay estuary since 1987, p. 403-424. In J. T. Hollibaugh [ed.], San Francisco Bay: The Ecosystem. AAAS.
Kimmerer, W. J., A. E. Parker, U. Lidström, and E. J. Carpenter. 2012. Short-term and interannual variability in primary production in the low-salinity zone of the San Francisco Estuary. Estuaries and Coasts 35:913-929.
Laprise, R., and J. J. Dodson. 1993. Nature of environmental variability experienced by benthic and pelagic animals in the St. Lawrence Estuary, Canada. Marine Ecology Progress Series 94:129-139.
Lehman, P. W. 2000. The influence of climate on phytoplankton community biomass in San Francisco Bay Estuary. Limnology and Oceanography 45:580-590.
Lehman, P. W., G. Boyer, C. Hall, S. Waller, and K. Gehrts. 2005. Distribution and toxicity of a new colonial Microcystis aeruginosa bloom in the San Francisco Bay Estuary, California. Hydrobiologia 541:87-99.
Murrell, M. C., and J. T. Hollibaugh. 1998. Microzooplankton grazing in northern San Francisco Bay measured by the dilution method. Aquatic Microbial Ecology 15:53-63.
Orsi, J., and W. Mecum. 1986. Zooplankton distribution and abundance in the Sacramento-San Joaquin Delta in relation to certain environmental factors. Estuaries 9:326-339.
Orsi, J. J., and W. L. Mecum. 1996. Food limitation as the probable cause of a long-term decline in the abundance of Neomysis mercedis the opossum shrimp in the Sacramento-San Joaquin estuary. Pp. 375-401 in San Francisco Bay: The Ecosystem, edited by J. T. Hollibaugh. AAAS.
Orsi, J. J., and S. Ohtsuka. 1999. Introduction of the Asian copepods Acartiella sinensis, Tortanus dextrilobatus (Copepoda: Calanoida), and Limnoithona tetraspina (Copepoda: Cyclopoida) to the San Francisco Estuary, California, USA. Plankton Biology and Ecology 46:128-131.
Rollwagen-Bollens, G., S. Gifford, and S. M. Bollens. 2011. The role of protistan microzooplankton in the Upper San Francisco Estuary planktonic food web: Source or sink? Estuaries and Coasts 34:1026-1038.
Winder, M., and A. D. Jassby. 2011. Shifts in zooplankton community structure: Implications for food web processes in the upper San Francisco Estuary. Estuaries and Coasts 34:675-690.
Winder, M., A. D. Jassby, and R. Mac Nally. 2011. Synergies between climate anomalies and hydrological modifications facilitate estuarine biotic invasions. Ecology Letters 14(8):749-757.
York, J., B. Costas, and G. Mcmanus. 2010. Microzooplankton grazing in green water—results from two contrasting estuaries. Estuaries and Coasts 34:373-385.