National Academies Press: OpenBook
« Previous: CONCLUSION
Suggested Citation:"REFERENCES." National Research Council. 1995. Calculating the Secrets of Life: Contributions of the Mathematical Sciences to Molecular Biology. Washington, DC: The National Academies Press. doi: 10.17226/2121.
×
Page 54
Suggested Citation:"REFERENCES." National Research Council. 1995. Calculating the Secrets of Life: Contributions of the Mathematical Sciences to Molecular Biology. Washington, DC: The National Academies Press. doi: 10.17226/2121.
×
Page 55

Below is the uncorrected machine-read text of this chapter, intended to provide our own search engines and external engines with highly rich, chapter-representative searchable text of each book. Because it is UNCORRECTED material, please consider the following text as a useful but insufficient proxy for the authoritative book pages.

MAPPING HEREDITY: USING PROBABILISTIC MODELS AND ALGORITHMS TO MAP GENES AND GENOMES 54 REFERENCES Arratia, R., E.S. Lander, S. Tavaré, and M.S. Waterman, 1991, "Genomic mapping by anchoring random clones: A mathematical analysis," Genomics 11, 806-827. Bodmer, W.F., C.J. Bailey, J. Bodmer, H.J.R. Bussey, A. Ellis, P. Gorman, F.C. Lucibello, V.A. Murday, S.H. Rider, P. Scambler, D. Sheer, E. Solomon, and N.K. Spurr, 1987, "Localization of the gene for familial adenomatous polyposis on chromosome 5," Nature 328, 614-616. Booth, K.S., and G.S. Leuker, 1975, "Testing the consecutive ones property, interval graphs, and graph planarity using PQ-tree algorithms," Journal of Computational Systems Science 13, 335-379. Botstein, D., R.L. White, M. Skolnick, and R.W. Davis, 1980, "Construction of a genetic linkage map in man using restriction fragment length polymorphisms," American Journal of Human Genetics 32, 314-331. Chumakov, I., P. Rigault, S. Guillou, P. Ougen, A. Billaut, G. Guasconi, P. Gervy, I. Le Gall, P. Soularue, and L. Grinas, 1992, "Continuum of overlapping clones spanning the entire human chromosome 21q," Nature 359, 380-387. Dietrich, W., H. Katz, S.E. Lincoln, H.-S. Shin, J. Friedman, N.C. Dracopoli, and E.S. Lander, 1992, "A genetic map of the mouse suitable for typing intraspecific crosses," Genetics 131, 423-447. Dietrich, W.F., E.S. Lander, J.S. Smith, A.R. Moser, K.A. Gould, C. Luongo, N. Borenstein, and W. Dove, 1993, "Genetic identification of Mom-1, a major modifier locus affecting Min-induced intestinal neoplasia in the mouse," Cell 75, 631-639. Elston, R.C., and J. Stewart, 1971, "A general model for the analysis of pedigree data," Human Heredity 21, 523-542. Feingold, E., P.O. Brown, and D. Siegmund, 1993, "Gaussian models for genetic linkage analysis using complete high resolution maps of identity by descent," American Journal of Human Genetics 53, 234-251. Foote, S., D. Vollrath, A. Hilton, and D.C. Page, 1992, "The human Y chromosome: Overlapping DNA clones spanning the euchromatic region," Science 258, 60-66. Green, E., and M.V. Olson, 1990, "Systematic screening of yeast artificial chromosome libraries using the polymerase chain reaction," Proceedings of the National Academy of Sciences USA 87, 1213-1217. Groden, J., A. Thliveris, W. Samowitz, M. Carlson, L. Gelbert, H. Albertsen, G. Joslyn, J. Stevens, L. Spirio, M. Robertson, L. Sergeant, K. Krapcho, E. Wolff, R. Burt, J.P. Hughes, J. Warrington, J. McPherson, J. Wasmuth, D. Le Paslier, H. Abderrahim, D. Cohen, M. Leppert, and R. White, 1991, "Identification and characterization of the familial adenomatous polyposis coli gene," Cell 66, 589-600. Kinzler, K.W., M.C. Nilbert, L.K. Su, B. Vogelstein, T.M. Bryan, D.B. Levy, K.J. Smith, A.C. Preisinger, P. Hedge, D. McKechnie, R. Finniear, A. Markham, J. Groffen, M.S. Boguski, S.F. Altschul, A. Horii, H. Ando, Y. Miyoshi, Y. Miki, I. Nishisho, and Y. Nakamura, 1991, "Identification of FAP locus genes from chromosome 5q21," Science 253, 661-665.

MAPPING HEREDITY: USING PROBABILISTIC MODELS AND ALGORITHMS TO MAP GENES AND GENOMES 55 Kohara, Y., A. Akiyama, and K. Isono, 1987, "The physical map of the whole E. coli chromosome: Applications of a new strategy for rapid analysis and sorting of a large genomic library," Cell 50, 495-508. Kong, A., 1991, "Efficient methods for computing linkage of recessive diseases in inbred pedigrees," Genetics and Epidemiology 8, 81-103. Kong, A., M. Frigge, N. Cox, and W.H. Wong, 1992a, "Linkage analysis with adjustments for covariates: A method combining peeling with Gibbs sampling," Cytogenetics and Cell Genetics 59, 208-210. Kong, A., M. Frigge, M. Irwin, and N. Cox, 1992b, "Importance sampling. I. Computing multimodel p values in linkage analysis," American Journal of Human Genetics 51, 1413-1429. Kong, A., N. Cox, M. Frigge, and M. Irwin, 1993, "Sequential imputation for multipoint linkage analysis," Genetics and Epidemiology 10, 483488. Lander, E.S., and D. Botstein, 1989, "Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps," Genetics 121, 185-199. Lander, E.S., and P. Green, 1987, "Construction of multilocus genetic linkage maps in humans," Proceedings of the National Academy of Sciences USA 84, 2363-2367. Lander, E.S., and M.S. Waterman, 1988, "Genomic mapping by fingerprinting random clones: A mathematical analysis," Genomics 2, 231-239. Leppert, M., M. Dobbs, P. Scambler, P. O'Connell, Y. Nakamura, D. Stauffer, S. Woodward, R. Burt, J. Hughes, E. Gardner, M. Lathrop, J. Wasmuth, J.M. Lalouel, and R. White, 1987, "The gene for familial polyposis coli maps to the long arm of chromosome 5," Science 238, 1411-1413. Moser, A.R., H.C. Pitot, and W.F. Dove, 1990, "A dominant mutation that predisposes to multiple intestinal neoplasia in the mouse," Science 247, 322-324. Nishisho, I., Y. Nakamura, Y. Miyoshi, Y. Miki, H. Ando, A. Horii, K. Koyama, J. Utsunomiya, S. Baba, P. Hedge, A. Markham, A.J. Krush, G. Peterson, S.R. Hamilton, M.C. Nilbert, D.B. Levy, T.M. Bryan, A.C. Preisinger, K.J. Smith, L.K. Su, K.W. Kinzler, and B. Vogelstein, 1991, "Mutations of chromosome 5q21 genes in FAP and colorectal cancer patients," Science 253, 665-669. Olson, M.V., J.E. Dutchik, M.Y. Graham, G.M. Brodeur, C. Helms, M. Frank, M. MacCollin, R. Scheinman, and T. Frank, 1986, "Random- clone strategy for genomic restriction mapping in yeast," Proceedings of the National Academy of Sciences USA 83, 7826-7830. Ott, J., 1991, Analysis of Human Genetic Linkage, Baltimore, Md.: Johns Hopkins University Press. Su, L.K., K.W. Kinzler, B. Vogelstein, A.C. Preisinger, A.R. Moser, C. Luongo, K.A. Gould, and W.F. Dove, 1992, "A germline mutation of the murine homolog of the APC gene causes multiple intestinal neoplasia," Science 256, 668-670. Thompson, E., and E. Wijsman, 1990, The Gibbs Sampler on Extended Pedigrees: Monte Carlo Methods for the Genetic Analysis of Complex Traits, Technical Report 193, Department of Statistics, University of Washington, Seattle.

Next: Chapter 3 Seeing Conserved Signals: Using Algorithms to Detect Similarities between Biosequences »
Calculating the Secrets of Life: Contributions of the Mathematical Sciences to Molecular Biology Get This Book
×
 Calculating the Secrets of Life: Contributions of the Mathematical Sciences to Molecular Biology
Buy Paperback | $80.00
MyNAP members save 10% online.
Login or Register to save!
Download Free PDF

As researchers have pursued biology's secrets to the molecular level, mathematical and computer sciences have played an increasingly important role—in genome mapping, population genetics, and even the controversial search for "Eve," hypothetical mother of the human race.

In this first-ever survey of the partnership between the two fields, leading experts look at how mathematical research and methods have made possible important discoveries in biology.

The volume explores how differential geometry, topology, and differential mechanics have allowed researchers to "wind" and "unwind" DNA's double helix to understand the phenomenon of supercoiling. It explains how mathematical tools are revealing the workings of enzymes and proteins. And it describes how mathematicians are detecting echoes from the origin of life by applying stochastic and statistical theory to the study of DNA sequences.

This informative and motivational book will be of interest to researchers, research administrators, and educators and students in mathematics, computer sciences, and biology.

READ FREE ONLINE

  1. ×

    Welcome to OpenBook!

    You're looking at OpenBook, NAP.edu's online reading room since 1999. Based on feedback from you, our users, we've made some improvements that make it easier than ever to read thousands of publications on our website.

    Do you want to take a quick tour of the OpenBook's features?

    No Thanks Take a Tour »
  2. ×

    Show this book's table of contents, where you can jump to any chapter by name.

    « Back Next »
  3. ×

    ...or use these buttons to go back to the previous chapter or skip to the next one.

    « Back Next »
  4. ×

    Jump up to the previous page or down to the next one. Also, you can type in a page number and press Enter to go directly to that page in the book.

    « Back Next »
  5. ×

    To search the entire text of this book, type in your search term here and press Enter.

    « Back Next »
  6. ×

    Share a link to this book page on your preferred social network or via email.

    « Back Next »
  7. ×

    View our suggested citation for this chapter.

    « Back Next »
  8. ×

    Ready to take your reading offline? Click here to buy this book in print or download it as a free PDF, if available.

    « Back Next »
Stay Connected!