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Model Configuration
Pages 6-14

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From page 6...
... Using daily averaged values of flow as a forcing for the SAV model is likely adequate for simulating depth and light availability, but may not permit incorporation of additional mechanisms related to flow such as uprooting or dispersal. Model inputs include the hydraulics and water quality outputs from the QUAL2E model, with the FD model also receiving inputs from the SAV modeling.
From page 7...
... Currently, the FD model is not using results of the SAV modeling as inputs of habitat; rather the FD model is using inputted field data-derived habitat maps that abruptly update every six months (uncoupled mode)
From page 8...
... Movement is triggered when the FD densities in a cell exceed the maximum densities. Some movement between adjacent cells even if the present cell is not too crowded is included: if an adjacent cell is also less than maximum density, then there is a 50/50 chance to move there or stay in the presently occupied cell.
From page 9...
... Finally, there is always debate with a neighborhood search algorithm about what do the individual fish sense and how do they know how to go a neighboring cell without having visited it. The fine spatial resolution of the FD model helps in this case because it is easier to envision individuals detecting gradients and other cues on 1-m2 basis that would allow them to "sense" the conditions of the destination cell in advance of moving there.
From page 10...
... Because the observed densities were used to limit the model and then the calibration and validation use the sum of the simulated densities compared to the sum of the observed densities, the calibration and validation results showing good agreement is not as rigorous as it may seem based on the predicted versus observed abundances plots. This calibration strategy requires some skill because exceeding the specified maximum densities triggers movement, which can result in higher mortality.
From page 11...
... This can be difficult with a species like FD that spawns all year long and for which the present formulation includes density-dependence in the adult stage; defining over what months to sum egg production and how to accumulate recruits to obtain annual values needs to be considered. In addition, because of its potential importance on population dynamics, the density-dependence in adults should also be characterized and quantified.
From page 12...
... Present plans, which are subject to adjustment and change as the SAV modeling proceeds, suggest flow could affect the biomass of an SAV species in a cell by altering water depth, which determines light limitation of photosynthesis and temperature affecting respiration. The report also lists velocity directly affecting SAV, but its role it not yet clear.
From page 13...
... At low flow conditions, especially in the lake systems that can act as refuges, there could be a future scenario where nutrient issues may be critical. For example, abundant nutrients under low flow conditions may encourage growth of epiphytes that then limit light availability to the SAV.
From page 14...
... Nonetheless, future reports should provide more detail on decisions and assumptions, choices for parameterization, and occasionally referencing of the other coupled models (FD and water quality) in order to aid future users and developers of the SAV (and FD)


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